[R] A question about build R-2.10.0 on HP-UX ia64 server.

[Prof Brian Ripley]

On Mon, 18 Jan 2010, 亿元五角 wrote:

>
> I tried build R-2.10.1 and found this issue can be reproduce.
>
>
>
> I have sent this mail to R-devel list.

Without the missing information asked for, so we still will be unable 
to help.

>
>
>
> Thanks,
>
> Xu Jin
>
>> Date: Mon, 18 Jan 2010 09:44:00 +0000
>> From: ripley at stats.ox.ac.uk
>> To: dna_jin at hotmail.com
>> CC: r-help at r-project.org
>> Subject: Re: [R] A question about build R-2.10.0 on HP-UX ia64 server.
>>
>> Please ask about installing on unusual platforms on the R-devel list,
>> with reasonably complete output (we have not got the command that
>> failed, do not know which compilers there are ...). You might want to
>> talk directly to the Matrix authors, since this is a failure to
>> install Matrix right at the end of the R installation process.
>>
>> Also, no one is going to be interested in helping you with an obsolete
>> version of R: please try R 2.10.1 or R-patched when you report on
>> R-devel.
>>
>> It is several years since we have had any report about R on HP-UX, and
>> the notes on that platform last appeared in the R-admin manual for R
>> 2.9.2.
>>
>> On Mon, 18 Jan 2010, ???????? wrote:
>>
>>>
>>> Hi R usrs,
>>>
>>>
>>>
>>> I want to build R-2.10.0 on HP-UX, but I got following error message:
>>>
>>>
>>>
>>> ld: Unsatisfied symbol "zgemm" in file CHOLMOD.a[cholmod_l_super_numeric.o]
>>> ld: Unsatisfied symbol "zgemv" in file CHOLMOD.a[cholmod_l_super_solve.o]
>>> ld: Unsatisfied symbol "zherk" in file CHOLMOD.a[cholmod_l_super_numeric.o]
>>> ld: Unsatisfied symbol "ztrsm" in file CHOLMOD.a[cholmod_l_super_numeric.o]
>>> ld: Unsatisfied symbol "ztrsv" in file CHOLMOD.a[cholmod_l_super_solve.o]
>>> ld: Unsatisfied symbol "dgemm" in file CHOLMOD.a[cholmod_l_super_numeric.o]
>>> ld: Unsatisfied symbol "dgemv" in file CHOLMOD.a[cholmod_l_super_solve.o]
>>> ld: Unsatisfied symbol "main" in file <no file>
>>> ld: Unsatisfied symbol "alloca" in file CHMfactor.o
>>> ld: Unsatisfied symbol "dpotrf" in file CHOLMOD.a[cholmod_l_super_numeric.o]
>>> ld: Unsatisfied symbol "zpotrf" in file CHOLMOD.a[cholmod_l_super_numeric.o]
>>> ld: Unsatisfied symbol "dsyrk" in file CHOLMOD.a[cholmod_l_super_numeric.o]
>>> ld: Unsatisfied symbol "dtrsm" in file CHOLMOD.a[cholmod_l_super_numeric.o]
>>> ld: Unsatisfied symbol "dtrsv" in file CHOLMOD.a[cholmod_l_super_solve.o]
>>> 14 errors.
>>> gmake[3]: *** [Matrix.sl] Error 1
>>> gmake[3]: Leaving directory `/rnd/homes/jixu/tmp/R-2.10.1/src/library/Recommended/Matrix/src'
>>> ERROR: compilation failed for package 'Matrix'
>>> * removing '/rnd/homes/jixu/tmp/R-2.10.1/library/Matrix'
>>> gmake[2]: *** [Matrix.ts] Error 1
>>> gmake[2]: Leaving directory `/rnd/homes/jixu/tmp/R-2.10.1/src/library/Recommended'
>>> gmake[1]: *** [recommended-packages] Error 2
>>> gmake[1]: Leaving directory `/rnd/homes/jixu/tmp/R-2.10.1/src/library/Recommended'
>>> gmake: *** [stamp-recommended] Error 2
>>>
>>>
>>>
>>> Any help or suggestions would be appreciated.
>>>
>>>
>>>
>>> In addition I use below parameter:
>>>
>>> export CC="cc"
>>> export CFLAGS="-AC99 +DD64"
>>> export CXX="aCC"
>>> export CXXFLAGS="-b +DD64"
>>> export F77="f90"
>>> export FFLAGS="+DD64"
>>> export LDFLAGS="-L/opt/fortran90/lib -L/usr/lib/hpux64"
>>>
>>>
>>>
>>> ./configure --prefix=$/usr/homes/myrhome --enable-R-shlib --with-x --with-readline=no
>>>
>>>
>>>
>>> Thanks in advance,
>>>
>>> Xu Jin
>>>
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>>>
>>> ______________________________________________
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>>> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
>>> and provide commented, minimal, self-contained, reproducible code.
>>>
>>
>> --
>> Brian D. Ripley, ripley at stats.ox.ac.uk
>> Professor of Applied Statistics, http://www.stats.ox.ac.uk/~ripley/
>> University of Oxford, Tel: +44 1865 272861 (self)
>> 1 South Parks Road, +44 1865 272866 (PA)
>> Oxford OX1 3TG, UK Fax: +44 1865 272595
>
> _________________________________________________________________
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>
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-- 
Brian D. Ripley,                  ripley at stats.ox.ac.uk
Professor of Applied Statistics,  http://www.stats.ox.ac.uk/~ripley/
University of Oxford,             Tel:  +44 1865 272861 (self)
1 South Parks Road,                     +44 1865 272866 (PA)
Oxford OX1 3TG, UK                Fax:  +44 1865 272595