[R] Sweve/cacheSweave
Duncan Murdoch
murdoch at stats.uwo.ca
Thu Feb 11 12:06:48 CET 2010
Unger, Kristian wrote:
> Hi there
>
> I have a problem with using Sweave in combination with the option driver = cacheSweave.
>
> Whichever code I try to run - when it comes to converting the tex file into pdf it comes up with the same errors (\csname \endcsname errors). Does anybody have an idea what it going wrong?
>
>
>> Sweave("pgfSweave-example.Rnw",driver = cacheSweaveDriver)
>>
> Writing to file pgfSweave-example.tex
> Processing code chunks ...
> 1 : term verbatim (label=setup)
> 2 : echo term verbatim (label=data)
> 3 : term verbatim eps pdf (label=boxplot)
>
> You can now run LaTeX on 'pgfSweave-example.tex'
>
>
>> tools::texi2dvi("pgfSweave-example.tex", pdf=TRUE)
>>
> Error in tools::texi2dvi("pgfSweave-example.tex", pdf = TRUE) :
> running 'texi2dvi' on 'pgfSweave-example.tex' failed
>
> LaTeX errors:
> C:/Imperial/Sileida/DOUBLECHECK/ALL/eval_amps/pgfSweave-example.tex:10: Missing
> \endcsname inserted
> The control sequence marked <to be read again> should
> not appear between \csname and \endcsname.
>
> C:/Imperial/Sileida/DOUBLECHECK/ALL/eval_amps/pgfSweave-example.tex:10: LaTeX E
> rror: Missing \begin{document}.
>
I think this is the important error: it looks as though your .tex file
isn't a complete LaTeX document. The other errors likely follow from this.
Duncan Murdoch
> See the LaTeX manual or LaTeX Companion for explanation.
> Type H <return> for immediate help
> C:/Imperial/Sileida/DOUBLECHECK/ALL/eval_amps/pgfSweave-example.tex:10: Extra \
> endcsname
> I'm ignoring this, since I wasn't doing a \csname.
>
>
> C:/Imperial/Sileida/DOUBLECHECK/ALL/eval_amps/pgfSweave-example.tex:10: Missing
> \endcsname inserted
> The control sequence marked <to be read again> should
> not appear between \csname and \endcsname.
>
> C:/Imperial/Sileida/DOUBLECHECK/ALL/eval_amps/pgfSweave-example.tex:10: Extra \
> endcsname
> I'm ignoring this, since I wasn't doing a \csname.
>
> I am running this under Windows XP, R version 2.9.2 (2009-08-24), > package.version("cacheSweave")
> [1] "0.4-3".
>
> Any help or advice on this would be highly appreciated!
>
> Best wishes
>
> Kristian
>
> _____
>
> Dr Kristian Unger
>
> Bioinformaticist Chernobyl Tissue Bank
>
> Division of Surgery and Cancer
>
> Imperial College London
>
> Rm G02, Ground floor G Block
> Hammersmith Hospital
> Du Cane Road,
> London W12 0HS
>
> Tel +44-20-8383-2443
>
> Mob +44-795-1080619
>
> Skype kristianunger
>
> http://www1.imperial.ac.uk/medicine/about/divisions/is/histo/
> http://www.chernobyltissuebank.com
>
>
> [[alternative HTML version deleted]]
>
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