[R] vectorised recovery of strsplit value ??
maddox
matthewgdodds at hotmail.com
Wed Dec 22 22:02:27 CET 2010
Dear Guru's
My first steps with R have ground to a halt! I have a vector of sample
identifiers
> sampleIDs
[1] "D1_1" "D1_2" "D1_3" "D1_4" "D1_5" "D1_6" "D1_7" "D1_8"
[9] "D1_9" "D1_10" "D1_11" "D1_12" "F1_13" "F1_14" "F1_15" "F1_16"
[17] "F1_17" "F1_18" "F1_19" "F1_20" "F1_21" "F1_22" "F1_23" "F1_24"
[25] "DDC_25" "DDC_26" "DDC_27" "DDC_28" "DDC_29" "DDC_30" "DDC_31" "DDC_32"
[33] "DDC_33" "DDC_34" "DDC_35" "DDC_36"
from which I've split the prefix identifier using strsplit
> splitIDs <- strsplit( as.character(sampleIDs), "_")
> splitIDs
[[1]]
[1] "D1" "1"
[[2]]
[1] "D1" "2"
[[3]]
[1] "D1" "3"
[[4]]
[1] "D1" "4" etc
I am now struggling to work with the prefix identifiers (D1, F1, DDC)
because the only way I have figured out to access them is with
splitIDs[[i]][1] i.e. it seems like I have to use a loop to get the
identifiers into a factor and counted.
Is there a vectorised solution someone can suggest?
Or an alternative strategy .. these are early days using R for me!
Thanks
regards
M
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