[R] package MuMI
Ben Bolker
bbolker at gmail.com
Wed Aug 25 21:36:21 CEST 2010
Marino Taussig De Bodonia, Agnese <agnese.marino09 <at> imperial.ac.uk> writes:
> I am using the package "MuMI" to run all the possible combinations
> of variables in my full model, and select
> my best models. When I enter my variables in the original model I
> write them like this
>
> lm(y~ a +b +c +a:b)
>
> However, "MuMI" will also use the variable b:a, which I do not want
> in my model.
>
> How do I stop that from happening?
>
(1) I think you mean "MuMIn".
(2) Please send a reproducible example! (Hint: see the posting
guide that is referred to at the bottom of all R-help messages ...)
(3) [now proceeding to try to guess what you mean ...]
a:b and b:a have identical meanings in the R formula syntax.
I tried to do something like what I thought you might have meant
and got what seemed to be reasonable answers.
> library(MuMIn)
> dat <- data.frame(y=runif(100),a=factor(sample(1:5,replace=TRUE,size=100)),
+ b= factor(sample(1:5,replace=TRUE,size=100)), c=runif(100))
> m1 <- lm(y~a+b+c+a:b,data=dat)
> dredge(m1)
Global model: lm(formula = y ~ a + b + c + a:b, data = dat)
---
Model selection table
(Int) a b c a:b k R.sq Adj.R.sq RSS AIC AICc delta weight
4 0.6385 -0.1643 3 0.03019 0.020290 7.386 29.23 29.48 0.0000 0.420
1 0.5530 2 0.00000 0.000000 7.616 30.29 30.42 0.9392 0.262
7 0.6283 + -0.1461 7 0.09397 0.045770 6.900 30.42 31.64 2.1650 0.142
3 0.5533 + 6 0.07067 0.031540 7.077 30.96 31.87 2.3890 0.127
6 0.6134 + -0.2199 7 0.06700 0.017370 7.105 33.36 34.57 5.0980 0.033
2 0.5202 + 6 0.01989 -0.021380 7.464 36.28 37.19 7.7100 0.009
8 0.6232 + + -0.1941 11 0.12050 0.032540 6.698 35.45 38.45 8.9760 0.005
5 0.5352 + + 10 0.08490 0.004455 6.969 37.42 39.89 10.4100 0.002
10 0.7433 + + -0.2504 + 27 0.27800 0.034140 5.498 47.71 68.71 39.2400 0.000
9 0.6193 + + + 26 0.23150 -0.014420 5.853 51.96 71.19 41.7200 0.000
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