[R] How to handle missing values for the GeneMeta package?

Martin Morgan mtmorgan at fhcrc.org
Mon Sep 21 15:39:09 CEST 2009


Hi Vassilis --

Vassilis Golfinopoulos wrote:
> Hello all,
> 
> It seems that the GeneMeta passage returns NA in the respective row if
> any gene in the data sets to be synthesised are missing. Do you know
> of a way to overcome this problem?
> 
> I tried using the 'impute' package to fill-in the missing values, but
> R crashes if 'impute' and 'GeneMeta' packages are used together. I
> have asked a separate question for that.

Ask questions about Bioconductor packages on the Bioconductor mailing list

  http://bioconductor.org/docs/mailList.html

so you're more likely to get informed answers.

Include a reproducible example to illustrate your problem, so others can
help. For instance

> library(GeneMeta)
> library(impute)
>

No 'crash' so no problem??

Martin

> 
> Thanks
> Vassilis
> 
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