[R] correlation help

[John Kane]

?cor
?cor.test

--- On Sun, 9/20/09, Adrian Johnson <oriolebaltimore at gmail.com> wrote:

> From: Adrian Johnson <oriolebaltimore at gmail.com>
> Subject: [R] correlation help
> To: r-help at r-project.org
> Received: Sunday, September 20, 2009, 5:00 PM
> Dear group,
> 
> I have a matrix like the following:
> 
> Name     Sample1   
> sample2    sample3   sample4 .....
> sample(n)
> nm1        10.5     
>     13.5         
> 30             31
> nm2         8   
>           11     
>       34         
>    29
> nm3         9   
>           10.3     
>     27.8         35
> nm(j)
> 
> 
> I want to be able to calculate correlation between 
> all pairs of names.
> For example (nm1,nm2), (nm1,nm3), (nm1,nmj), (nm2,nm3),
> (nm2,nmj)....
> 
> Then I want to calculate the significance of correlation
> using t-score
> or p-value.
> 
> I can calculate correlation coeffecient in excel but not
> significance
> in both excel and R.
> 
> I want to be able to do it in R, I appreciate your help.
> thank you.
> Ad.
> 
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> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained,
> reproducible code.
> 


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