[R] Odp: boxplot
Petr PIKAL
petr.pikal at precheza.cz
Thu Sep 17 17:48:07 CEST 2009
Hi
I do not know rma but from help page boxplot requires as input a formula,
list (only some list of numerics), data frame or numeric vector. I am not
sure if your object is one of these. If not you need to convert it to
object which is acceptable for boxplot.
Regards
Petr
r-help-bounces at r-project.org napsal dne 17.09.2009 08:29:43:
> Hi,
>
> I m not able to plot normalized data(normalization by rma) using
boxplot. I
> don't know why?
> basically, object(formed of normalized data) belong to ExpressionSet
class.
>
> It is showing error
>
> Error in x[!xna] : object of type 'S4' is not subsettable
> In addition: Warning messages:
> 1: In is.na(x) : is.na() applied to non-(list or vector) of type 'S4'
> 2: In is.na(x) : is.na() applied to non-(list or vector) of type 'S4'
>
>
> Now, how to plot? Should I have use another function?
>
> By
> Sukhbir Singh Rattan
>
> [[alternative HTML version deleted]]
>
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