[R] fitting nonlinear model
cls59
chuck at sharpsteen.net
Wed Sep 9 21:35:56 CEST 2009
Bill Hyman wrote:
>
> Hi Milton,
>
> Thanks for your help. Actually, I would like to fit a non-linear fashion.
> For some data like below, 'lm' may not work very well. Do you have idea?
> Thanks again!
>
>
That's why information equation you are trying to fit is very important. For
example, the BOD data set in R is:
>BOD
Time demand
1 1 8.3
2 2 10.3
3 3 19.0
4 4 16.0
5 5 15.6
6 7 19.8
BOD demand can be modeled as a function of Time using the following
equation:
demand = BODu * ( 1 - exp( -K * Time ) )
Where BODu and K are the unknown parameters of the model. One way of doing a
non-linear fit in R is to use nls(), the nonlinear least-squares function:
model <- nls( demand ~ BODu * ( 1 - exp( -K * Time ) ),
data = BOD,
start = list( BODu = max( BOD[['demand']]), k = 0.1 )
)
Note that with nls(), it is necessary to provide starting guesses for the
parameters as a list using the "start" parameters of the nls function.
Hope this helps!
-Charlie
P.S.
Providing an example of the equation you are trying to fit to your data will
help us provide an answer that is more specific to your situation.
-----
Charlie Sharpsteen
Undergraduate
Environmental Resources Engineering
Humboldt State University
--
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