[R] [BioC] Is there a package similar to mogene10stprobeset.db by for Affymetrix Exon Arrays?
pengyu.ut at gmail.com
Wed Oct 28 01:44:01 CET 2009
mogene10stprobeset.db is generated with AnnotationDbi for mouse gene
array. I don't find a package that seems generated by AnnotationDbi
for exon arrays on the webpage you mentioned. Is it correct?
On Tue, Oct 27, 2009 at 7:00 PM, Marc Carlson <mcarlson at fhcrc.org> wrote:
> Hi Peng,
> I am not completely clear from your post what you want. But most of our
> annotation packages can be found here:
> If you don't find what you want, and you have gene accessions mapped
> onto probes (something that should still be possible for an
> exon-oriented platform), then you can use SQLForge in AnnotationDbi to
> generate an annotation package. To do so see the SQLForge vignette
> which can be found in the AnnotationDbi package right here:
> Peng Yu wrote:
>> There are gene level annotation for Gene Array mogene10stprobeset.db.
>> I'm wondering if there are any package available for Exon Arrays?
>> Bioconductor mailing list
>> Bioconductor at stat.math.ethz.ch
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