[R] Importing tRNA data into R ?

[James W. MacDonald]

Hi Tal,

Tal Galili wrote:
> Hello dear R help group,
> I would like to download the tRNA data on:
> http://gtrnadb.ucsc.edu/download.html
> 
> And then import it into R.
> 
> Can anyone direct me as to how to do so?

You probably want the readFASTA() function in Biostrings, which is part 
of Bioconductor.

There are several packages in BioC that are useful for doing things with 
sequence data once read in, depending on what your purpose is. Further 
questions should probably be directed to the BioC listserv 
<bioconductor at stat.math.ethz.ch>.

Best,

Jim




> 
> 
> Thanks,
> Tal
> 
> 
> 
> 
> ----------------------------------------------
> 
> 
> My contact information:
> Tal Galili
> E-mail: Tal.Galili at gmail.com
> Phone number: 972-52-7275845
> FaceBook: Tal Galili
> My Blogs:
> http://www.talgalili.com (Web and general, Hebrew)
> http://www.biostatistics.co.il (Statistics, Hebrew)
> http://www.r-statistics.com/ (Statistics,R, English)
> 
> 
> ----------------------------------------------
> 
> 
> My contact information:
> Tal Galili
> E-mail: Tal.Galili at gmail.com
> Phone number: 972-52-7275845
> FaceBook: Tal Galili
> My Blogs:
> http://www.talgalili.com (Web and general, Hebrew)
> http://www.biostatistics.co.il (Statistics, Hebrew)
> http://www.r-statistics.com/ (Statistics,R, English)
> 
> 	[[alternative HTML version deleted]]
> 
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-- 
James W. MacDonald, M.S.
Biostatistician
Douglas Lab
University of Michigan
Department of Human Genetics
5912 Buhl
1241 E. Catherine St.
Ann Arbor MI 48109-5618
734-615-7826