[R] Problem building R 2.10.0 - Matrix package
Martin Maechler
maechler at stat.math.ethz.ch
Thu Nov 12 09:52:51 CET 2009
>>>>> "TA" == Thomas Adams <Thomas.Adams at noaa.gov>
>>>>> on Mon, 02 Nov 2009 11:04:30 -0500 writes:
TA> All:
TA> Attached is the output file from building R 2.10.0 on RedHat Linux. I
TA> have never previously experienced any problems when building R from
TA> source with new releases. But, now I get a compile error with the Matrix
TA> package:
TA> CHOLMOD/Include/cholmod.h:87:22: error: UFconfig.h: No such file or
TA> directory
TA> make[3]: *** [CHMfactor.o] Error 1
TA> make[3]: Leaving directory `/tmp/RtmppKsKKl/R.INSTALL327b23c6/Matrix/src'
TA> ERROR: compilation failed for package 'Matrix'
very strange. UFconfig.h is part of the Matrix package sources,
and we (Matrix maintainers, or R core) have never heard of such
a problem.
Could it be that your disk / filesystem was close to 100% full,
and during unpacking (of the Matrix package source in
R-2.10.0/src/library/Recommended/
where you should have (ls -l) something like
-rw-r--r-- ... ... ... 1991383 Oct 9 04:05 Matrix_0.999375-31.tar.gz
) parts where lost?
Have you ever retried the whole procedure?
TA> Any help or suggestions would be appreciated.
TA> I am simply doing this, as I always have:
TA> ./configure --prefix=/Local/install/location (I can not use the default)
TA> make
TA> I should add that even with this error with the Matrix package, I can do
TA> a 'make install' OK. Subsequently, R seems to come up fine from the
TA> command line…
well, but
library(Matrix)
would fail, wouldn't it?
Regards,
Martin
TA> Regards,
TA> Tom
TA> --
TA> Thomas E Adams
TA> National Weather Service
TA> Ohio River Forecast Center
TA> 1901 South State Route 134
TA> Wilmington, OH 45177
TA> EMAIL: thomas.adams at noaa.gov
TA> VOICE: 937-383-0528
TA> FAX: 937-383-0033
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