[R] [BioC] MatLab SimBiology
Dr. Sanjay Bhatikar
sanjay.bhatikar at biobase-international.com
Wed Nov 4 10:43:48 CET 2009
The differential equations solvers (LSODA, etc.) used in Matlab are all
available in R. You may need to set-up the equations yourself, from a
format such as SBML. The capability is all there in R - maybe just not
as nicely packaged and pre-digested as Matlab. If you access to
programming resources, choose R.
Regards,
- Sanjay
mauede at alice.it wrote:
> Is there any R package that implements the same capability of MatLab toolbox called SimBiology ?
> We are expecially interested in protein-protein interactions and network analysis.
> As far as I know SimBiology implements a system of ODEs reflecting the kinetic chemical reactions.
> We would be more interested in stochastic simulations.
> Thank you in advance.
>
> Maura
>
>
> tutti i telefonini TIM!
>
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