[R] hierarchical clustering with Jaccard index

Don McKenzie dmck at u.washington.edu
Tue Nov 3 14:31:20 CET 2009


Try "Jaccard".   :-)

karuna m wrote:
> hi,
> I want to do hierarchical clustering with Jaccord index. I tried to do with vegan package for finding index and hierarchical clustering with hclust function. While doing clustering it is showing an error message as "invalid distance method". I would be grateful if anyone tells how to rectify the error.
> Thanks in advance,
>  
> kind regards,
> 
> Ms.Karunambigai M
> PhD Scholar
> Dept. of Biostatistics
> NIMHANS
> Bangalore
> India
> 
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-- 
Don McKenzie
Research Ecologist
Pacific Wildland Fire Sciences Lab
US Forest Service

Affiliate Professor
College of Forest Resources and CSES Climate Impacts Group
University of Washington

phone: 206-732-7824
cell: 206-321-5966
dmck at u.washington.edu




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