[R] no snowfall on debian after lenny upgrade
Martin Renner
martin.renner at stonebow.otago.ac.nz
Tue Mar 24 18:07:09 CET 2009
I feel like I've tried the works on something that should be obvious
but I'm stuck. Package snowfall used to run just great under debian
etch (amd-64, 2x quad-core). After upgrading to lenny (debian 5,
reinstalled from scratch), I haven't been able to get snowfall running
again. Password-less ssh works fine to localhost, its IP, or zero-
config name. But when calling sfInit I invariably get this error
message below. What puzzles me is that "ssh localhost" works without a
hitch but the socket connection fails. Any suggestions would be
greatly appreciated.
Best,
Martin
Error in socketConnection(port = port, server = TRUE, blocking =
TRUE, :
cannot open the connection
In addition: Warning message:
In socketConnection(port = port, server = TRUE, blocking = TRUE, :
port 10187 cannot be opened
Error in sfInit() :
Starting of snow cluster failed! Error in socketConnection(port =
port, server = TRUE, blocking = TRUE, :
cannot open the connection
Error in socketConnection(port = port, server = TRUE, blocking =
TRUE, :
cannot open the connection
Calls: source -> eval.with.vis -> eval.with.vis -> sfInit
Execution halted
I've tried this with the stable debian version of R (2.7.1) as well as
compiled from R-2.8.1 (with current snowfall) and the latest from sid
(see below).
platform x86_64-pc-linux-gnu
arch x86_64
os linux-gnu
system x86_64, linux-gnu
status alpha
major 2
minor 9.0
year 2009
month 03
day 20
svn rev 48169
language R
version.string R version 2.9.0 alpha (2009-03-20 r48169)
Martin Renner Postdoctoral Fellow
School of Aquatic and Fishery Sciences University of Washington
Seattle, WA 98195-5020, USA
current address:
Alaska Maritime NWR
Homer, AK 99603, USA
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