[R] Prevent saving the workspace while running a script in batch mode

Jim_S virtualreal at gmail.com
Sun Mar 8 17:07:54 CET 2009


This works fine.
Thank you for the quick response,

Jim


David Winsemius wrote:
> 
> ?quit   # ,save="no"
> 
> --  
> DW
> 
> On Mar 8, 2009, at 11:19 AM, Jim_S wrote:
> 
>>
>> Dear R-user,
>>
>> I'm running a certain R script in DOS batch mode. Is there a way to  
>> prevent
>> R from saving the workspace once this script is finished? I'm asking  
>> this
>> because the resulting .RData file has the size of >70MB. I don't  
>> need this
>> file since my script already writes the required output and this  
>> makes the
>> whole process very slow (>15 minutes each time)
>>
>>
>> FYI, my script:
>>
>> setwd("M:/Program Files/Soskat/Models")
>> library(randomForest)
>> CT <- read.table("CRD.txt",header=TRUE,sep="\t")
>> memory.limit(1000)
>> filename <-
>> paste 
>> ("CR",read.table("DTE.txt",header=FALSE,sep="\t"),".Rdata",sep="")
>> load(filename)
>> write.table(predict(model, newdata = CT, type =  
>> "response"),file="CRP.txt")
>>
>>
>> and my batch line:
>>
>> e:\progra~1\R\bin\R CMD BATCH m:\progra~1\soskat\models\CR.r
>>
>> Thanks in advance,
>>
>> Jim
>> -- 
>> View this message in context:
>> http://www.nabble.com/Prevent-saving-the-workspace-while-running-a-script-in-batch-mode-tp22399051p22399051.html
>> Sent from the R help mailing list archive at Nabble.com.
>>
>> ______________________________________________
>> R-help at r-project.org mailing list
>> https://stat.ethz.ch/mailman/listinfo/r-help
>> PLEASE do read the posting guide
>> http://www.R-project.org/posting-guide.html
>> and provide commented, minimal, self-contained, reproducible code.
> 
> David Winsemius, MD
> Heritage Laboratories
> West Hartford, CT
> 
> ______________________________________________
> R-help at r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide
> http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.
> 
> 

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