[R] parallel R?

Max Kuhn mxkuhn at gmail.com
Sat Jun 27 14:52:24 CEST 2009


For cross-validation, the caret package was designed to easily go  
between sequential and parallel processing (using nws, mpi or anything  
else).

See the last examples in ?train.

Max



On Jun 26, 2009, at 11:28 AM, Michael <comtech.usa at gmail.com> wrote:

> I guess when we move to Amazon AWS,
>
> we have to rewrite the whole R programs?
>
> On Fri, Jun 26, 2009 at 8:05 AM, Dirk Eddelbuettel<edd at debian.org>  
> wrote:
>>
>> On 26 June 2009 at 07:40, Michael wrote:
>> | Hi all,
>> |
>> | Lots of big IT companies are renting out their computing  
>> facilities.
>> | Amazon has one such service. In my understanding, this will
>> | dramatically improve the speed of my R program -- currently the  
>> cross
>> | validation and model selection part is the bottle neck. It take a  
>> few
>> | days to just finish optimal parameter tuning via CV.
>> |
>> | Could anybody shed some lights on this? Is it completely  
>> transparent
>> | to move my R program to a rented parallel computing facility?
>> |
>> | Moreover, at my PC level, I have a 4-core PC, is there anything we
>> | could do in R to speed up my CV programs?
>>
>> Try this link:   http://lmgtfy.com/?q=parallel+computing+with+R
>>
>> A survey paper on parallel computing with R by Schmidberger et al  
>> will be
>> fortcoming shortly in Journal of Statistical Software -- that is at
>> http://jstatsoft.org and a Google query will lead to preprints.
>>
>> Also note that R has a support site network called 'CRAN' which  
>> contains so
>> called 'Task Views'. Amnong these you may find this one of interest:
>>
>>   http://cran.r-project.org/web/views/HighPerformanceComputing.html
>>
>> As to your initial question:  yes, people do use R on the Amazon  
>> service.
>>
>> Dirk
>>
>> --
>> Three out of two people have difficulties with fractions.
>>
>
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