[R] [R-pkgs] package installation fails (RandomFields)

[Uwe Ligges]

William Dunlap wrote:
> The offending lines don't look right to me:
> 
>      38 typedef struct key_type;
>     261 typedef struct mpp_storage;
>     309 typedef struct cov_fct;
> 
> Shouldn't they be 'typedef struct struct_name typedefed_name'?
> Later in the file there are proper typedef's for these things.


In that case, can you please report it to the RandomFields maintainer?

Thank you very much,
Uwe Ligges


> Bill Dunlap
> TIBCO Software Inc - Spotfire Division
> wdunlap tibco.com  
> 
>> -----Original Message-----
>> From: r-help-bounces at r-project.org 
>> [mailto:r-help-bounces at r-project.org] On Behalf Of Martin Maechler
>> Sent: Thursday, June 11, 2009 12:42 AM
>> To: Drew Hoysak
>> Cc: r-help at r-project.org
>> Subject: Re: [R] [R-pkgs] package installation fails (RandomFields)
>>
>> [[ NOTE:  This accidentally was approved to go to  R-packages,
>>    	  it should never have gone there, and I have deleted it
>>    	  from the archives.
>>    Please *only* reply to R-help (and the OP)! 
>> ]]
>>
>>>>>>> "DH" == Drew Hoysak <hoysak at wcgwave.ca>
>>>>>>>     on Wed, 10 Jun 2009 14:40:32 -0500 writes:
>>     DH> I have been unable to install the package 
>> RandomFields. I am using R 
>>     DH> 2.9.0-4 on Ubuntu 9.04.
>>
>> How exactly did you install R?   Just as ubuntu package?  
>> {probably, given the somewhat particular version number}
>>
>>     DH> To install, I use the command:
>>
>>     DH> sudo R CMD INSTALL RandomFields_1.3.37.tar.gz
>>
>>
>>     DH> The output follows below. Any help Would be appreciated.
>>
>>     DH> D. Hoysak
>>     DH> Brandon University
>>
>>
>>     DH> * Installing to library '/usr/local/lib/R/site-library'
>>     DH> * Installing *source* package 'RandomFields' ...
>>     DH> ** libs
>>     DH> g++ -I/usr/share/R/include -g -fpic -g -O2 -c D.H.cc -o D.H.o
>>     DH> In file included from D.H.cc:27:
>>     DH> RFsimu.h:38: warning: 'typedef' was ignored in this 
>> declaration
>>     DH> RFsimu.h:261: warning: 'typedef' was ignored in this 
>> declaration
>>     DH> RFsimu.h:309: warning: 'typedef' was ignored in this 
>> declaration
>>
>>     [..........................]
>>     [..........................]
>>
>>     DH> RFsimu.h:309: warning: 'typedef' was ignored in this 
>> declaration
>>     DH> g++ -I/usr/share/R/include -g -fpic -g -O2 -c 
>> win_linux_aux.cc -o 
>>     DH> win_linux_aux.o
>>     DH> g++ -shared -o RandomFields.so D.H.o Hyperfcts.o 
>> MPP.o MPPFcts.o 
>>     DH> RFCovFcts.o RFcircembed.o RFdirect.o RFempvario.o RFgetNset.o 
>>     DH> RFhyperplan.o RFinitNerror.o RFnugget.o RFother.o 
>> RFsimu.o RFspectral.o 
>>     DH> RFtbm.o Xempvario.o addownfctns.o auxiliary.o avltr.o 
>> extremes.o 
>>     DH> modelling.o win_linux_aux.o -llapack -L/usr/lib/R/lib -lR
>>     DH> /usr/bin/ld: cannot find -llapack
>>     	^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
>>
>> This looks like a setup problem of the R installation you have;
>> I'd guess that you would also see problems installing other R
>> packages that rely on LAPACK.
>>
>>
>>
>>     DH> collect2: ld returned 1 exit status
>>     DH> make: *** [RandomFields.so] Error 1
>>     DH> ERROR: compilation failed for package 'RandomFields'
>>     DH> * Removing '/usr/local/lib/R/site-library/RandomFields'
>>
>> ______________________________________________
>> R-help at r-project.org mailing list
>> https://stat.ethz.ch/mailman/listinfo/r-help
>> PLEASE do read the posting guide 
>> http://www.R-project.org/posting-guide.html
>> and provide commented, minimal, self-contained, reproducible code.
>>
> 
> ______________________________________________
> R-help at r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.