[R] "R CMD check" does not find a mistake

[Uwe Ligges]

Henrik Bengtsson wrote:
> "using R version 2.9.0 beta (2009-04-04 r48290)"
> 
> As a start, Kurt et al. are for sure using a much more recent version
> (probably also the very latest patched version).

and if not only then at least also R-devel.

Uwe






> 
> /H
> 
> On Tue, Jun 9, 2009 at 7:17 AM, Christophe
> Genolini<cgenolin at u-paris10.fr> wrote:
>> Hi the list,
>>
>> I build a package. They was a mistake in it, but R CMD check did not find
>> it. Is that normal ?
>>
>> Here is what Kurt gets (which is right, I did this mistake):
>>
>> --- 8< ----------------
>> * checking for code/documentation mismatches ... WARNING
>> S4 class codoc mismatches from documentation object 'LongData-class':
>> Slots for class 'LongData'
>>  Code: id other time traj varName
>>  Docs: id time traj varName
>> --- 8< ----------------
>>
>> But here is what I get :
>>
>> --- 8< ----------------
>> R CMD check longitudinalData
>> * checking for working pdflatex ... OK
>> * using log directory 'C:/Documents and Settings/Christophe/Mes
>> documents/Recher
>> che/Trajectoires/kmeal/longitudinalData.Rcheck'
>> * using R version 2.9.0 beta (2009-04-04 r48290)
>> * using session charset: ISO8859-1
>> * checking for file 'longitudinalData/DESCRIPTION' ... OK
>> * checking extension type ... Package
>> * this is package 'longitudinalData' version '0.5'
>> * package encoding: latin1
>> * checking package dependencies ... OK
>> * checking if this is a source package ... OK
>> * checking for .dll and .exe files ... OK
>> * checking whether package 'longitudinalData' can be installed ... OK
>> * checking package directory ... OK
>> * checking for portable file names ... OK
>> * checking DESCRIPTION meta-information ... OK
>> * checking top-level files ... OK
>> * checking index information ... OK
>> * checking package subdirectories ... OK
>> * checking R files for non-ASCII characters ... OK
>> * checking R files for syntax errors ... OK
>> * checking whether the package can be loaded ... OK
>> * checking whether the package can be loaded with stated dependencies ... OK
>> * checking for unstated dependencies in R code ... OK
>> * checking S3 generic/method consistency ... OK
>> * checking replacement functions ... OK
>> * checking foreign function calls ... OK
>> * checking R code for possible problems ... OK
>> * checking Rd files ... OK
>> * checking Rd files against version 2 parser ... OK
>> * checking Rd cross-references ... OK
>> * checking for missing documentation entries ... OK
>> * checking for code/documentation mismatches ... OK
>> * checking Rd \usage sections ... OK
>> * checking examples ... OK
>> * checking PDF version of manual ... OK
>>
>>
>> R CMD build longitudinalData
>> * checking for file 'longitudinalData/DESCRIPTION' ... OK
>> * preparing 'longitudinalData':
>> * checking DESCRIPTION meta-information ... OK
>> * removing junk files
>> * checking for LF line-endings in source and make files
>> * checking for empty or unneeded directories
>> * building 'longitudinalData_0.5.tar.gz'
>> --- 8< ----------------
>>
>> Christophe
>>
>> ______________________________________________
>> R-help at r-project.org mailing list
>> https://stat.ethz.ch/mailman/listinfo/r-help
>> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
>> and provide commented, minimal, self-contained, reproducible code.
>>
> 
> ______________________________________________
> R-help at r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.