[R] error when installing rjags

markleeds at verizon.net markleeds at verizon.net
Tue Jul 21 09:18:24 CEST 2009


   Hi All: I get the following error when trying to install the rjags package.
   I've installed the
   jags software and I'm using Fedora 10.0 and my sessionInfo is at the bottom
   of this email.
   I'm also sorry if this email ends up having control A's all over it. I still
   haven't figured how to fix that. Thanks.
   [1] "LOADING MASS LIBRARY"
   checking for prefix by checking for jags... /usr/bin/jags
   configure: creating ./config.status
   config.status: creating src/Makevars
   configure: creating ./config.status
   config.status: creating src/Makevars
   config.status: creating R/unix/zzz.R
   g++ -m32 -I/usr/include/R -I/usr/include/JAGS -I/usr/local/include  Â
   -fpic    -O2  -g  -pipe  -Wall  -Wp,-D_FORTIFY_SOURCE=2  -fexceptions
   -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i386 -mtune=generic
   -fasynchronous-unwind-tables -c jags.cc -o jags.o
   jags.cc:8:21: error Console.h No such file or directory
   jags.cc:9:24: error: util/naing.h: No such file or directory
   jags.cc:20: error: 'SArray' was not declared in this scope
   jags.cc:21: error expected ',' or ';' before { token
   R version 2.9.0 (2009-04-17)
   i386-redhat-linux-gnu
   locale:
   LC_CTYPE=en_US.utf8;LC_NUMERIC=C;LC_TIME=en_US.utf8;LC_COLLATE=en_US.utf8;LC
   _MONETARY=C;LC_MESSAGES=en_US.utf8;LC_PAPER=en_US.utf8;LC_NAME=C;LC_ADDRESS=
   C;LC_TELEPHONE=C;LC_MEASUREMENT=en_US.utf8;LC_IDENTIFICATION=C
   attached base packages:
   [1] datasets  utils     stats     graphics  grDevices methods Â
   base   Â
   other attached packages:
   Â [1] gsubfn_0.3-8Â Â Â Â Â Â  proto_0.3-8Â Â Â Â Â Â Â  latticeExtra_0.5-4
   RColorBrewer_1.0-2    filehash_2.0-1Â Â Â Â     reshape_0.8.2Â Â Â Â Â
   plyr_0.1.8Â Â Â Â Â Â Â Â  rOpenBUGS_0.0-1Â Â Â  caret_4.19Â Â Â Â Â Â Â
   [10]        dyn_0.2-8Â Â Â Â Â Â Â Â Â        coda_0.13-4Â Â Â Â Â Â Â
   lattice_0.17-22Â Â Â  zoo_1.5-5Â Â Â Â Â Â Â Â Â  chron_2.3-30Â Â Â Â Â Â
   MASS_7.2-46Â Â Â Â Â Â
   loaded via a namespace (and not attached):
   [1] grid_2.9.0



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