[R] sorting matrix to match an ordered list
Nick Matzke
matzke at berkeley.edu
Tue Jan 27 21:26:38 CET 2009
Hi all,
This can't be very hard, but it is sticking me because I am a beginner.
Setup:
x = rbind(c(0,1,1), c(2,3,1), c(4,5,1))
y = as.matrix(x)
rownames(y) = c("a","b","c")
colnames(y) = c("a","b","c")
ordered_list = c("b", "c", "a")
How do I produce a new matrix, z, with the rows and columns both sorted
in the order specified by ordered_list?
(I have a big 124x124 output matrix that comes out with the rows &
columns in alphabetical order, I want them in a pre-specified order I
can get from the input file, but the above is an example of the
conceptual issue)
Thanks!
Nick
--
====================================================
Nicholas J. Matzke
Ph.D. student, Graduate Student Researcher
Huelsenbeck Lab
Center for Theoretical Evolutionary Genomics
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University of California, Berkeley
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