[R] UNIX Installation of package "systemfit" fails
Yong Wang
wangyong1 at gmail.com
Thu Feb 5 10:22:11 CET 2009
Dear list
I am trying to install the systemfit package under unix,
install.packages(systemfit)
the installation failed. I am attaching the error and version
information below,
(if dependencies=TRUE, much more error)
any help appreciated
best,
yong
=====================================================================
> install.packages("systemfit")
Warning in install.packages("systemfit") :
argument 'lib' is missing: using
'/usr/home/d/068/meta/R/x86_64-unknown-linux-gnu-library/2.7'
--- Please select a CRAN mirror for use in this session ---
CRAN mirror
1: Argentina 2: Australia
3: Austria 4: Belgium
5: Brazil (PR) 6: Brazil (RJ)
7: Brazil (SP 1) 8: Brazil (SP 2)
9: Canada (BC) 10: Canada (ON)
11: Chile 12: China
13: Croatia 14: Denmark
15: France (Toulouse) 16: France (Lyon)
17: France (Paris) 18: Germany (Goettingen)
19: Germany (Muenchen) 20: Iran
21: Ireland 22: Italy (Milano)
23: Italy (Padua) 24: Italy (Palermo)
25: Japan (Aizu) 26: Japan (Tokyo)
27: Japan (Tsukuba) 28: Korea
29: Mexico 30: Netherlands (Amsterdam 2)
31: Netherlands (Utrecht) 32: New Zealand
33: Norway 34: Poland (Oswiecim)
35: Poland (Wroclaw) 36: Portugal
37: Russia 38: Singapore 1
39: Singapore 2 40: Slovenia (Ljubljana)
41: South Africa 42: Spain (Madrid)
43: Sweden 44: Switzerland
45: Taiwan (Taichung) 46: Taiwan (Taipeh)
47: Thailand 48: Turkey
49: UK (Bristol) 50: USA (CA 1)
51: USA (CA 2) 52: USA (IA)
53: USA (MI) 54: USA (MO)
55: USA (NC) 56: USA (OH)
57: USA (PA 1) 58: USA (PA 2)
59: USA (TX 1) 60: USA (TX 2)
61: USA (WA)
Selection: 57
also installing the dependencies âzooâ, âMatrixâ, âcarâ, âlmtestâ
trying URL 'http://lib.stat.cmu.edu/R/CRAN/src/contrib/zoo_1.5-4.tar.gz'
Content type 'application/x-gzip' length 609057 bytes (594 Kb)
opened URL
==================================================
downloaded 594 Kb
trying URL 'http://lib.stat.cmu.edu/R/CRAN/src/contrib/Matrix_0.999375-20.tar.gz'
Content type 'application/x-gzip' length 1954872 bytes (1.9 Mb)
opened URL
==================================================
downloaded 1.9 Mb
trying URL 'http://lib.stat.cmu.edu/R/CRAN/src/contrib/car_1.2-12.tar.gz'
Content type 'application/x-gzip' length 220728 bytes (215 Kb)
opened URL
==================================================
downloaded 215 Kb
trying URL 'http://lib.stat.cmu.edu/R/CRAN/src/contrib/lmtest_0.9-22.tar.gz'
Content type 'application/x-gzip' length 191099 bytes (186 Kb)
opened URL
==================================================
downloaded 186 Kb
trying URL 'http://lib.stat.cmu.edu/R/CRAN/src/contrib/systemfit_1.0-8.tar.gz'
Content type 'application/x-gzip' length 727116 bytes (710 Kb)
opened URL
==================================================
downloaded 710 Kb
ERROR: failed to lock directory
'/usr/home/d/068/wangyong/R/x86_64-unknown-linux-gnu-library/2.7' for
modifying
Try removing '/usr/home/d/068/wangyong/R/x86_64-unknown-linux-gnu-library/2.7/00LOCK'
ERROR: failed to lock directory
'/usr/home/d/068/wangyong/R/x86_64-unknown-linux-gnu-library/2.7' for
modifying
Try removing '/usr/home/d/068/wangyong/R/x86_64-unknown-linux-gnu-library/2.7/00LOCK'
ERROR: failed to lock directory
'/usr/home/d/068/wangyong/R/x86_64-unknown-linux-gnu-library/2.7' for
modifying
Try removing '/usr/home/d/068/wangyong/R/x86_64-unknown-linux-gnu-library/2.7/00LOCK'
ERROR: failed to lock directory
'/usr/home/d/068/wangyong/R/x86_64-unknown-linux-gnu-library/2.7' for
modifying
Try removing '/usr/home/d/068/wangyong/R/x86_64-unknown-linux-gnu-library/2.7/00LOCK'
ERROR: failed to lock directory
'/usr/home/d/068/wangyong/R/x86_64-unknown-linux-gnu-library/2.7' for
modifying
Try removing '/usr/home/d/068/wangyong/R/x86_64-unknown-linux-gnu-library/2.7/00LOCK'
The downloaded packages are in
/tmp/RtmpJ28hPv/downloaded_packages
Warning messages:
1: In install.packages("systemfit") :
installation of package 'zoo' had non-zero exit status
2: In install.packages("systemfit") :
installation of package 'Matrix' had non-zero exit status
3: In install.packages("systemfit") :
installation of package 'car' had non-zero exit status
4: In install.packages("systemfit") :
installation of package 'lmtest' had non-zero exit status
5: In install.packages("systemfit") :
installation of package 'systemfit' had non-zero exit status
>
>
>
> version
_
platform x86_64-unknown-linux-gnu
arch x86_64
os linux-gnu
system x86_64, linux-gnu
status
major 2
minor 7.0
year 2008
month 04
day 22
svn rev 45424
language R
version.string R version 2.7.0 (2008-04-22)
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