[R] odfWeave produces output file that OO can't open

[Max Kuhn]

Can you:

  - run any of the examples in the package's examples directory
  - provide the results of sessionInfo()
  - tell us what version of OO
  - read the posting guide?

Max

On Sun, Dec 13, 2009 at 2:17 PM, Michael Kubovy <kubovy at virginia.edu> wrote:
> Dear R-helpers,
>
> I'm trying to learn how to use odfSweave.
>
> Here is my source file (in /Users/mk/myTeach/2010-1-7720/odfWeave):
> ****************************************
> Analysis of the iris Data
>
> Created on \Sexpr{date()}
>
> <<loadLibs, echo = FALSE, results = hide>>=
> # I usually load the libraries first so that any output produced by loading the library does not end up in the document
> library(MASS)
> library(lattice)
> library(grid)
> data(iris)
> @
>
> This famous (Fisher's or Anderson's) iris data set gives the measurements in centimeters of the variables sepal length and width and petal length and width, respectively, for \Sexpr{dim(iris)[1]/3} flowers from each of \Sexpr{length(levels(iris$Species))} species of iris. The species are \Sexpr{paste(levels(iris$Species), collapse = ", ")}.
>
> Here is a bulleted list of the species:
> <<showOutputList, echo = FALSE, results = xml>>=
> odfItemize(levels(iris$Species))
> @
> ****************************************
>
> With
> ****************************************
> R version 2.10.0 (2009-10-26)
> x86_64-apple-darwin9.8.0
> locale:
> [1] C/C/en_US/C/C/C
> attached base packages:
> [1] grid      stats     graphics  grDevices datasets  utils     methods
> [8] base
> other attached packages:
> [1] MASS_7.3-4      odfWeave_0.7.10 XML_2.6-0       lattice_0.17-26
> [5] JGR_1.7-0       iplots_1.1-3    JavaGD_0.5-2    rJava_0.8-1
> loaded via a namespace (and not attached):
> [1] Matrix_0.999375-32 lme4_0.999375-32   tools_2.10.0
> ****************************************
> I run:
> ****************************************
>> odfWeave('simple1.odt','simpleOut.odt')
>  Copying  simple1.odt
>  Setting wd to  /var/folders/TG/TG6nWu2pHYCI-BdWWiyMxU+++TI/-Tmp-//RtmplOpSLO/odfWeave13103539684
>  Unzipping ODF file using unzip -o simple1.odt
>
>  Removing  simple1.odt
>  Creating a Pictures directory
>
>  Pre-processing the contents
>  Sweaving  content.Rnw
>
>  Writing to file content_1.xml
>  Processing code chunks ...
>    1 : term hide(label=loadLibs)
>    2 : term xml(label=showOutputList)
>
>  'content_1.xml' has been Sweaved
>
>  Removing content.xml
>
>  Post-processing the contents
>  Removing content.Rnw
>  Removing styles.xml
>  Renaming styles_2.xml to styles.xml
>  Removing extra files
>
>  Packaging file using zip -r simple1.odt .
>  Copying  simple1.odt
>  Resetting wd
>  Removing  /var/folders/TG/TG6nWu2pHYCI-BdWWiyMxU+++TI/-Tmp-//RtmplOpSLO/odfWeave13103539684
>
>  Done
> Warning message:
> closing unused connection 3 (content.xml)
> ****************************************
>
> When I try to open simpleOut.odt I get: "Format error discovered in the file in sub-document content.xml at 22,124(row,col)." The file content.xml is empty.
>
>
>
>
> ______________________________________________
> Professor Michael Kubovy
> University of Virginia
> Department of Psychology
> for mail add:
> P.O.Box 400400
> Charlottesville, VA 22904-4400
> USA
> for FedEx or UPS add:
> Gilmer Hall, Room 102
> McCormick Road
> Charlottesville, VA 22903
> USA
>                room    phone
> Office:    B011 +1-434-982-4729
> Lab:        B019        +1-434-982-4751
> Fax:                            +1-434-982-4766
> WWW:    http://www.people.virginia.edu/~mk9y/
>
> ______________________________________________
> R-help at r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.
>



-- 

Max