[R] stepAIC function
Ashta
sewashm at gmail.com
Fri Dec 4 15:29:24 CET 2009
Hi All,
I am trying to run the following script but have problem,
coxm<- coxph(Surv(sdat$time, sdat$cens)~hd+nawtg+nwwg+ntpg+cy+nseas,data=sdat)
coxm<-stepAIC(coxm,~.^2)
The error message is
Error: could not find function "stepAIC"
I tried to install the package but I could not find it. Where can i get it?
The other question is that I want to get the Kaplan-Meier Estimate
for each covariate in the model,
Like
covaraite n Events Mean, S.E.(mean) ,Median, 95% LCL, 95% UCL
0 14 10 2.87 .03 2.2
1.938 infi
1 11 9 1.06 .67 1.1
0.29 2.48
I used
sdat.fit0 <- survfit(Surv(sdat$time, sdat$cens)~sdat$ntpg, data = sdat,
type = "kaplan-meier", conf.type="plain")
sdat.fit0
Instead I got the following,
Call: survfit(formula = Surv(sdat$time, sdat$cens) ~ sdat$ntpg, data = sdat,
type = "kaplan-meier", conf.type = "plain")
records n.max n.start events median
0.95LCL 0.95UCL
sdat$ntpg=0 3576 3576 3576 311 NA NA NA
sdat$ntpg=1 4851 4851 4851 466 NA NA NA
I would appreciate if some one can help me.
thanks
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