[R] Error with hgu133a2.db

mkna005 mkna005 mkna005 at aucklanduni.ac.nz
Mon Dec 14 01:07:09 CET 2009


Hi,
I'm trying to get this library working under R2.10.0. I downloaded it
and installed it from zip file. i get the following output.

> library(hgu133a2.db)
Error in library(hgu133a2.db) : there is no package called 'hgu133a2.db'
> utils:::menuInstallLocal()
package 'hgu133a2.db' successfully unpacked and MD5 sums checked
> library(hgu133a2.db)
Loading required package: AnnotationDbi
Loading required package: Biobase

Welcome to Bioconductor

 Vignettes contain introductory material. To view, type
 'openVignette()'. To cite Bioconductor, see
 'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: DBI
Error in fun(...) : could not find function "createAnnObjs.HUMANCHIP_DB"
In addition: Warning message:
package 'hgu133a2.db' was built under R version 2.7.0 and help will
not work correctly
Please re-install it
Error : .onLoad failed in 'loadNamespace' for 'hgu133a2.db'
Error: package/namespace load failed for 'hgu133a2.db'

Whats the problem and how can I fix it?

Thanks

Christoph



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