[R] Problem during porting R-2.7.2 on HP-UP 11.11 PA-Risc

[Peter Dalgaard]

claus-juergen.neumann at basf.com wrote:
> Dear Peter,
> thank you so much for your help, you have 100% the correct ideas.
> Please excuse me when i contact you again. My compile is 99% done, but a
> other error appears,
> I have the one or other idea and i checked the admin-manual, but please
> see, what do you are meaning.
> I think my problem is upcoming from "/lib/libRblas.sl"
>   
This is moving a bit beyond me (shared library building on platforms
that I don't have will do that).
There are some notes on using f90 in the admin manual which you might
want to study. The direct cause seems to be  trying to use a shared
BLAS, so --enable-BLAS-shlib=no could be worth a try.
> We are starting the configure with following options:
> ./configure MAKE=gmake CC=gcc --with-readline=no --with-x=no
> --prefix=/opt/R --exec-prefix=/opt/R/bin --bindir=/opt/R/bin --without-blas
> --without-tcltk --without-libpng --without-system-zlib
>
>      BLAS                   use --without-blas
>      Tcl/Tk                 use --without-tcltk
>      libpng                 use --without-libpng
>      jpeg                   use --without-jpeglib
>      zlib                   use --without-system-zlib
> ----------------------------------------------------------------------------------
>
> starting now with gmake
> ----------------------------------------------------------------------------------
>
> R is now configured for hppa2.0w-hp-hpux11.11
>
>   Source directory:          .
>   Installation directory:         /opt/R
>
>   C compiler:                        gcc -std=gnu99  -g -O2
>   Fortran 77 compiler:         f90  -g
>
>   C++ compiler:                    g++  -g -O2
>   Fortran 90/95 compiler:    f90 -g
>   Obj-C compiler:
>
>   Interfaces supported:
>   External libraries:
>   Additional capabilities:     PNG, JPEG, iconv, MBCS, NLS
>   Options enabled:               shared BLAS, R profiling
>
>   Recommended packages:      yes
>
> configure: WARNING: you cannot build DVI versions of the R manuals
> configure: WARNING: you cannot build PDF versions of the R manuals
>
> After ./configure
> ----------------------------------------------------------------------------------
>
> the information and quick help, this was my problem to get the "configure"
> run.
> please see the results:
>
> gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include
> -I/usr/local/include -DHAVE_CONFIG_H   -fpic  -g -O2 -c g_alab_her.c -o g_
> alab_her.o
> gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include
> -I/usr/local/include -DHAVE_CONFIG_H   -fpic  -g -O2 -c g_cntrlify.c -o g_
> cntrlify.o
> gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include
> -I/usr/local/include -DHAVE_CONFIG_H   -fpic  -g -O2 -c g_fontdb.c -o g_fo
> ntdb.o
> gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include
> -I/usr/local/include -DHAVE_CONFIG_H   -fpic  -g -O2 -c g_her_glyph.c -o g
> _her_glyph.o
> gcc -std=gnu99 -shared -fPIC -Wl,-Bsymbolic -L/usr/local/lib -o vfonts.sl
> g_alab_her.o g_cntrlify.o g_fontdb.o g_her_glyph.o  -lm
> gmake[5]: Entering directory `/sw2/R-2.7.2/src/modules/vfonts'
> gmake[5]: Leaving directory `/sw2/R-2.7.2/src/modules/vfonts'
> gmake[4]: Leaving directory `/sw2/R-2.7.2/src/modules/vfonts'
> gmake[3]: Leaving directory `/sw2/R-2.7.2/src/modules/vfonts'
> gmake[2]: Leaving directory `/sw2/R-2.7.2/src/modules'
> gmake[2]: Entering directory `/sw2/R-2.7.2/src/library'
> mkdir ../../library
> gmake[3]: Entering directory `/sw2/R-2.7.2/src/library/profile'
> building system startup profile
> mkdir ../../../library/base
> mkdir ../../../library/base/R
> gmake[3]: Leaving directory `/sw2/R-2.7.2/src/library/profile'
> gmake[3]: Entering directory `/sw2/R-2.7.2/src/library/base'
> building package 'base'
> mkdir ../../../library/base/demo
> mkdir ../../../library/base/po
> mkdir ../../../library/base/man
> /usr/lib/dld.sl: Can't open shared library: ../../lib/libRblas.sl
> /usr/lib/dld.sl: No such file or directory
> /bin/sh[2]: 14653 Abort(coredump)
> gmake[3]: *** [all] Error 134
> gmake[3]: Leaving directory `/sw2/R-2.7.2/src/library/base'
> gmake[2]: *** [R] Error 1
> gmake[2]: Leaving directory `/sw2/R-2.7.2/src/library'
> gmake[1]: *** [R] Error 1
> gmake[1]: Leaving directory `/sw2/R-2.7.2/src'
> gmake: *** [R] Error 1
>
> Viele Grüße
> Claus-Juergen Neumann
> Global R&D Information Technology and Information Management
>
>
> Phone: +49 621 60-27453, Mobile: +49 172 7437400, Fax: +49 621 60-27092,
> E-Mail: claus-juergen.neumann at basf.com
> Postal Address: BASF SE, AP/CLS - LI444, D-67117 Limburgerhof, Germany
>
>
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>
>
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>
>   


-- 
   O__  ---- Peter Dalgaard             Øster Farimagsgade 5, Entr.B
  c/ /'_ --- Dept. of Biostatistics     PO Box 2099, 1014 Cph. K
 (*) \(*) -- University of Copenhagen   Denmark      Ph:  (+45) 35327918
~~~~~~~~~~ - (p.dalgaard at biostat.ku.dk)              FAX: (+45) 35327907