[R] help for compile sjava

[Martin Morgan]

Jacky -- Duncan has kindly allowed me to maintain SJava. A current 
version is not readily available, but I will provide you with some help 
off-list (and arrange for more public dissemination soon).

Martin

Jacky Huang wrote:
>  Dear duncan,
> 
> 
> I'm writing to ask you for some help about compiling SJava.
> 
> I encounter some errors when I compiled SJava on Window XP:
> 
> 
> 
> Building JNI header files...
> 
> Extracting the classes from Environment.jar
> 
> /jdk1.3/bin/jar: not found
> 
>    RForeignReference
> 
> 
> 
> After executing command "sh ./configure.win C:/Program Files/R/R-2.7.2", I
> modify the JAVA_HOME in file "$RHOME/ library\SJava\ configure.win",
> "$RHOME/ library\SJava\src\Makefile.win" and "$RHOME/
> library\SJava\src\Makevars.win" to my real JAVA_HOME "D:/Java/jdk1.5.0_06".
> Then execute "make pkg-SJava".
> 
> But it is failed. And I could not find any other files included
> "/jdk1.3/bin/jar" by default.
> 
> 
> 
> It is highly appreciated if you can give me some tips.
> 
> 
> 
> 
> 
> Thanks.
> 
> 


-- 
Martin Morgan
Computational Biology / Fred Hutchinson Cancer Research Center
1100 Fairview Ave. N.
PO Box 19024 Seattle, WA 98109

Location: Arnold Building M2 B169
Phone: (206) 667-2793