[R] Problem of running R console from Java on linux box

Prof Brian Ripley ripley at stats.ox.ac.uk
Sun Nov 2 12:07:24 CET 2008


On Sun, 2 Nov 2008, ZhaoWei wrote:

> Great, "--vanilla" works!
> Can you please tell me what this parameter means?
> And, it works with the execuatble(/usr/lib/R/bin/exec/R). I'm wondering
> is it possible to do the same with the shell script(/usr/bin/R), anyway
> when you type "R" in command line, it means the shell script.

It is intended for running the shell script, and it is documented in the 
most basic manual ('An Introduction to R'), with which you ought to become 
familiar.

>
> Thanks again!
>
>>> Hi the list:
>>>
>>>   I can not create R process from Java application with my linux box,
>>> the process never was created, or just terminated immediately after I
>>> called Runtime.getRuntime().exec(...)
>>>
>>
>> Did you check the error stream? I think you want to start R with a
>> command line argument like "--vanilla", without /bin/sh.
>>
>> Martin
>>
>>>   The command lines I have tried are(the paths are all correct):
>>>
>>>   "/bin/sh /usr/bin/R"
>>>   "/bin/sh -c /usr/bin/R"
>>>   "/usr/lib/R/bin/exec/R"(also set R_HOME=/usr/lib/R)
>>>
>>>   I also tried ProcessBuilder, which is no help. I'm confused, is this
>>> possible?
>>>
>>> Many Thanks!
>>>
>>> ______________________________________________
>>> R-help at r-project.org mailing list
>>> https://stat.ethz.ch/mailman/listinfo/r-help
>>> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
>>> and provide commented, minimal, self-contained, reproducible code.
>>
>> --
>> Martin Morgan
>> Computational Biology / Fred Hutchinson Cancer Research Center
>> 1100 Fairview Ave. N.
>> PO Box 19024 Seattle, WA 98109
>>
>> Location: Arnold Building M2 B169
>> Phone: (206) 667-2793
>
> ______________________________________________
> R-help at r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.
>

-- 
Brian D. Ripley,                  ripley at stats.ox.ac.uk
Professor of Applied Statistics,  http://www.stats.ox.ac.uk/~ripley/
University of Oxford,             Tel:  +44 1865 272861 (self)
1 South Parks Road,                     +44 1865 272866 (PA)
Oxford OX1 3TG, UK                Fax:  +44 1865 272595



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