[R] R benchmarking program

Philippe Grosjean phgrosjean at sciviews.org
Wed May 14 12:55:41 CEST 2008


Martin Maechler wrote:
>>>>>> "PhGr" == Philippe Grosjean <phgrosjean at sciviews.org>
>>>>>>     on Tue, 13 May 2008 16:10:15 +0200 writes:
> 
>     PhGr> Hello,
>     PhGr> I did this bechmark test. Perhaps is it a good oppotunity to rewrite it 
>     PhGr> and make it compatible with R 2.7.0, David?
> 
> I'll not really rewrite it (to make it "nice" in my eyes),
> but I'm fixing the problems with the fact that the 'Matrix'
> package you were using back then has been much changed in the
> mean time.
> 
> Expect a corrected benchmark R script within a day or so.

Thank you, Martin.

> Martin Maechler, ETH Zurich
> 
>     PhGr> Best,
>     PhGr> Philippe Grosjean
>     PhGr> ..............................................<°}))><........
>     PhGr> ) ) ) ) )
>     PhGr> ( ( ( ( (    Prof. Philippe Grosjean
>     PhGr> ) ) ) ) )
>     PhGr> ( ( ( ( (    Numerical Ecology of Aquatic Systems
>     PhGr> ) ) ) ) )   Mons-Hainaut University, Belgium
>     PhGr> ( ( ( ( (
>     PhGr> ..............................................................
> 
>     PhGr> Baker D.J. wrote:
>     >> Hi All,
>     >> 
>     >> I've just rebuild the latest R with the Goto BLAS on our new Intel quad core machines. I did a few basic matrix calculations, and I was very impressed by the performance I saw. I wonder if anyone has a more rigorous benchmarking program for R. I downloaded a old R test/benchmarking program (see below), and this didn't work with the current R, and so I wondered if anyone could please direct me to a more recent program that does a good all round test of R.
>     >> 
>     >> Regards -- David.
>     >> 
>     >> 
>     >> # R Benchmark 2.3 (21 April 2004)
>     >> # Warning: changes are not carefully checked yet!
>     >> # version 2.3 adapted to R 1.9.0
>     >> # Many thanks to Douglas Bates (bates at stat.wisc.edu) for improvements!
>     >> # version 2.2 adapted to R 1.8.0
>     >> # version 2.1 adapted to R 1.7.0
>     >> # version 2, scaled to get 1 +/- 0.1 sec with R 1.6.2
>     >> # using the standard ATLAS library (Rblas.dll)
>     >> # on a Pentium IV 1.6 Ghz with 1 Gb Ram on Win XP pro
>     >> 
>     >> # revised and optimized for R v. 1.5.x, 8 June 2002
>     >> # Requires additionnal libraries: Matrix, SuppDists
>     >> # Author : Philippe Grosjean
>     >> # eMail  : phgrosjean at sciviews.org
>     >> # Web    : http://www.sciviews.org
>     >> # License: GPL 2 or above at your convenience (see: http://www.gnu.org)
>     >> #
>     >> # Several tests are adapted from the Splus Benchmark Test V. 2
>     >> # by Stephan Steinhaus (stst at informatik.uni-frankfurt.de)
>     >> # Reference for Escoufier's equivalents vectors (test III.5):
>     >> # Escoufier Y., 1970. Echantillonnage dans une population de variables
>     >> # aleatoires réles. Publ. Inst. Statis. Univ. Paris 19 Fasc 4, 1-47.
>     >> 
>     >> ...
>     >> Error in getClass(Class, where = topenv(parent.frame())) :
>     >> "geMatrix" is not a defined class
>     >> Calls: new -> getClass
>     >> Execution halted
> 
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