[R] BiodiversityRGUI_problem2

[Gavin Simpson]

Branimir,

You would be better off addressing these issues with the package
maintainer. See the details for the package on CRAN for example to find
out the email address of the maintainer.

You could always use vegan the "old-fashioned" way and type the relevant
commands at the prompt. If your species data are in 'spp' and the
constraints in "env", then it can be little more than

require(vegan)
mod <- cca(spp ~ ., data = "env") ## for CCA or
mod2 <- rda(spp ~ ., data = "env") ## for RDA

Then see the helpfiles to see how to fit a model with a minimal set of
constraints.

G

On Sat, 2008-05-10 at 20:09 +0200, Branimir Hackenberger wrote:
> After some investigation I found out that constrained ordination is working
> fine under R version 6.5.0 and 6.5.1 but not under any of newer versions. Is
> it posible to repair/make something in for example newest version of R 7.0
> lito enble correct using of constrained ordination under BiodiversityRGUI
> environment?
> 
>  
> 
> 
> 
> 
> 	[[alternative HTML version deleted]]
> 
> ______________________________________________
> R-help at r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.
-- 
%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%
 Dr. Gavin Simpson             [t] +44 (0)20 7679 0522
 ECRC, UCL Geography,          [f] +44 (0)20 7679 0565
 Pearson Building,             [e] gavin.simpsonATNOSPAMucl.ac.uk
 Gower Street, London          [w] http://www.ucl.ac.uk/~ucfagls/
 UK. WC1E 6BT.                 [w] http://www.freshwaters.org.uk
%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%