[R] Exporting of R dendrogram object in the format of Eisen´s Cluster

Julian Lee julian at omniarray.com
Mon Mar 24 02:15:55 CET 2008


Hi 

You can try using the ctc package to export your dendrogram objects and use Cluster to open them.
This package is part of biocondutor.

>>source("http://bioconductor.org/biocLite.R")
>>biocLite('ctc')

regards

Julian Lee
----- Original Message -----
From: Jiří Voller <jirivoller at gmail.com>
To: r-help at r-project.org
Sent: Sun, 23 Mar 2008 22:48:33 +0800 (SGT)
Subject: [R] Exporting of R dendrogram object in the format of Eisen´s Cluster

Dear R-users,

I would like to use Cluster 3.0 for my data because of its zooming, link out
and  copy (gene)labels into clipboard options. Unfortunately the program
doesnt allow use of the distance metrics I would like to use. I would like
to ask if there is some library, that allows saving dendrogram object in the
format readable by Cluster.

Thank you for reply.

-- 
--------------------------------------------------------------------------------------------
Ji�� Voller
Laboratory of Growth Regulators
Palack� University & Institute of Experimental Botany AS CR
�lechtitel� 11, 783 71 Olomouc
Czech Republic
http://rustreg.upol.cz
landline: +420-585-634-855
cell: +420-737-520-506
fax: +420-585-634-870
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Julian Lee
Bioinformatics Specialist
Cellular and Molecular Research
National Cancer Center Singapore



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