[R] Problems with Package Installation.
hippie dream
tonightsthenight at gmail.com
Fri Jul 11 02:47:57 CEST 2008
I am having difficulty installing packages. For example, here I have tried to
install "gplots" but to no avail. I have tried multiple mirrors and
different packages (errbar) but after installation I seem to be unable to
access any of the commands or help pages. I am a little concerned about the
'lib' missing message but this has been present for previous successful
package installations. I running Ubuntu 8.04 and R 2.7.1. I am sorry but I
am totally lost here. Thanks in advance for your help.
> install.packages()
--- Please select a CRAN mirror for use in this session ---
Loading Tcl/Tk interface ... done
Warning in install.packages() :
argument 'lib' is missing: using
'/home/sam/R/i486-pc-linux-gnu-library/2.7'
trying URL 'http://cran.cnr.Berkeley.edu/src/contrib/gplots_2.6.0.tar.gz'
Content type 'application/x-gzip' length 241256 bytes (235 Kb)
opened URL
==================================================
downloaded 235 Kb
* Installing *source* package 'gplots' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: gtools
Loading required package: gdata
** help
>>> Building/Updating help pages for package 'gplots'
Formats: text html latex example
balloonplot text html latex example
bandplot text html latex example
barplot2 text html latex example
boxplot.n text html latex example
col2hex text html latex example
colorpanel text html latex example
heatmap.2 text html latex example
hist2d text html latex example
lowess text html latex example
ooplot text html latex example
overplot text html latex example
plot.lm2 text html latex example
plotCI text html latex example
plotmeans text html latex example
qqnorm.aov text html latex example
residplot text html latex
rich.color text html latex example
rtPCR text html latex example
sinkplot text html latex example
smartlegend text html latex example
space text html latex example
textplot text html latex example
wapply text html latex example
** building package indices ...
* DONE (gplots)
The downloaded packages are in
/tmp/Rtmp5NZLyb/downloaded_packages
> ?plotCI
No documentation for 'plotCI' in specified packages and libraries:
you could try 'help.search("plotCI")'
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