[R] debugging a try() statement
Juliet Hannah
juliet.hannah at gmail.com
Wed Feb 20 03:35:11 CET 2008
Dear R Users,
I implemented a try() statement that looks like:
<- function(index)
{
reduced_model <- try(glm.fit(X4,n,family=poisson(link="log")))
full_model <- try(glm.fit(X5,n,family=poisson(link="log")))
if (inherits(reduced_model,"try-error") ||
inherits(full_model,"try-error")) return(NA)
else
{
p <- pchisq(reduced_model$deviance - full_model$deviance,
reduced_model$df.residual - full_model$df.residual, lower.tail= FALSE)
return (p)
}
}
After an error occurs NA is returned. But after this occurs, all
values returned after this remain as an NA even though this error
should occur only 1/500 to 1/1000 times.
For example, I end up with a matrix like this:
[,1] [,2] [,3] [,4] [,5]
[1,] 0.6291316 0.08900112 0.06693455 6.401101e-06 0.06865330
[2,] 0.6259834 0.21140489 0.06722201 6.401101e-06 0.06833421
[3,] NA NA NA NA NA
[4,] NA NA NA NA NA
[5,] NA NA NA NA NA
Is there anything obviously incorrect with my function above. If not,
I will post a full example to illustrate my question.
Thanks for your help,
Juliet
More information about the R-help
mailing list