[R] How can I get the interpolated data?
pinwheels
cactus3 at 163.com
Mon Dec 22 03:49:00 CET 2008
Thank you very much!
It's very helpful to me!
David Winsemius wrote:
>
> If you look at the CR.rsm object with str() you will see that it
> inherits from the lm class of objects. Therefore the predict.lm method
> will be available and if you further look at:
>
> ?predict.lm
>
> You see that all you need to do is give it a dataframe that has the
> variables that match up with you model terms so this is a minimal
> example:
>
> > predict(CR.rsm, newdata=data.frame(x1=84,x2=171))
> 1
> 80.58806
>
> To get the entire range that you desire (and which the plotting
> function for GSM already produced) you need:
>
> ?expand.grid
>
> z <- predict(CR.rsm, expand.grid(x1=seq(86.88,len=21),
> x2=seq(175,179,len=21)))
>
> # or
> data.frame(expand.grid(x1=seq(86.88,len=21), x2=seq(175,179,len=21)),
> z = predict(CR.rsm, expand.grid(x1=seq(86.88,len=21),
> x2=seq(175,179,len=21))
> )
> )
>
> Since you are narrowing the range for your prediction, it's possible
> that you already realize that the original example plot was not just
> interpolating but also extrapolating considerably beyond the available
> data in places. That dataset only had 14 observations and rather
> sketchy or non-existent in the extremal regions of the x1 cross x2
> space.
>
> I greatly value the ability of the Hmisc/Design packages ability to
> restrict estimation and plotting to only those regions where the data
> will support estimates. I tried applying the perimeter function in
> Harrell's packages to your example, but the plot.Design function
> recognized that I was giving it a construct from a different package
> and refused to play.
>
> At any rate, HTH.
> --
> David Winsemius
> Heritage Labs
>
> On Dec 21, 2008, at 7:33 AM, pinwheels wrote:
>
>>
>> Hello,everybody!
>>
>> I am a beginner of R.
>>
>> And I want to ask a question. If anybody would help me, thank you
>> very much
>> ahead.
>> I want to plot something like a response surface, and I find the "rsm"
>> package.
>>
>> Some commands are like this:
>>
>> #code head
>> library(rsm)
>> CR = coded.data(ChemReact, x1 ~ Time, x2 ~ Temp)
>> CR.rsm = rsm(Yield ~ SO(x1,x2), data = CR)
>> summary(CR.rsm)
>> contour(CR.rsm,x1~x2)
>> #code end
>>
>> What if I want the data interpolated, what should I do?
>> For example:
>> There is a data frame like:
>>
>> xa1<-seq(86,88,len=21)
>> xa2<-seq(175,179,len=41)
>> z<- ... # referring site(xa1,xa2) from the contour plotted above
>>
>> or
>>
>> xa1 xa2 z
>> 86 175 ???
>> 86.1 175 ???
>> ... ... ...
>> 86.7 177.3 ???
>> ... .... ...
>> 88 179 ???
>>
>> or something alike.
>>
>> How could I get the z value(???) from the CR.rsm or the plotted
>> contour?
>> --
>> View this message in context:
>> http://www.nabble.com/How-can-I-get-the-interpolated-data--tp21114660p21114660.html
>> Sent from the R help mailing list archive at Nabble.com.
>>
>> ______________________________________________
>> R-help at r-project.org mailing list
>> https://stat.ethz.ch/mailman/listinfo/r-help
>> PLEASE do read the posting guide
>> http://www.R-project.org/posting-guide.html
>> and provide commented, minimal, self-contained, reproducible code.
>
> ______________________________________________
> R-help at r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide
> http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.
>
>
--
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