[R] hierarchical partitioning
vaniscotte
avanisco at univ-fcomte.fr
Tue Mar 13 14:49:51 CET 2007
Dear all,
I am trying to model variation of distribution of species assemblages
according to environmental variables. For that I use a log linear
multinomial regression.
In order to select variables that mostly discriminate the assemblages, I
tried to apply a hierarchical partitioning protocol to my data set.
For that I have adapted the all.regs() for multinomial model.
The problem is that I couldn't adapt partition() as I don't manage to
access the C code ("hierpart") which is called in this function. This is
a black box for me.
When I run partition() with the Log Likelihood values obtained for the
hierarchy of multinomial model, I obtain negative values for Independenr
contribution.
This suggest that there is a bug somewhere in my protocole.
I suppose that I missused partition(). Maybe my log lokelihood
(multinomial one) is not appropriate.
As someone had ever met this problem and could help me?
Many thanks
Amélie
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