[R] extract standard errors, write them to file

[Indermaur Lukas]

Hello

I want to repeatedly extract coefficients and standard errors from a GLM and write them into a file (1row=all coefficients of model A, 2 row=all coefficients of model B, etc.). I can extract coefficients but not standard errors. furthermore I fail to write extracted values line by line into the predifined matrix G.

I appreciate any idea to solve the problem

best regards

Lukas

 

#---------start code------------------------------------------------------------------------------------------------------------------------------------

global                           <- formula(logHRS~Ri + E  + Co + LWD +Alwd +W  + T2 + A  + N + Sex + y)      #1
richness_evenness        <- formula(logHRS~Ri + E  + D1 + D2  +D3   +D4 + D5 + D6 + N + Sex + y)        #2

all_models <- c(global, richness_evenness)
for (i in 1:length(all_models)) 
{
ts.model <- glm(all_models[[i]],family=gaussian,data=t.data)
G            <- matrix(NA,length(all_models),length(all_models))
G            <- coefficients(ts.model)             #regression coefficents (betas)
}
write.table(G, paste(t.url, file="Coefficients.txt"), sep="\t", quote=F)    

#---------end code-------------------------------------------------------------------------------------------------------------------------------------
 
 
 
°°° 
Lukas Indermaur, PhD student 
eawag / Swiss Federal Institute of Aquatic Science and Technology 
ECO - Department of Aquatic Ecology
Überlandstrasse 133
CH-8600 Dübendorf
Switzerland
 
Phone: +41 (0) 71 220 38 25
Fax    : +41 (0) 44 823 53 15 
Email: lukas.indermaur at eawag.ch
www.lukasindermaur.ch