[R] PlotAffyRNAdeg on Estrogen Data

James W. MacDonald jmacdon at med.umich.edu
Mon Feb 26 15:07:15 CET 2007


Hi Tony,

This question concerns a Bioconductor package, so is best asked on the 
BioC mailing list instead of R-help.

Best,

Jim

Brooks, Anthony B wrote:
> Hi everyone,
> 
> I'm trying to generate an RNA degradation plot of the Estrogen example
> data plot, but seem to get an error. I've tried defining an ylim value,
> ylim=c(0,30) , but it doesn't seem to work either.
> 
>  
> 
> My code is as follows:
> 
>  
> 
> 
>>RNAdeg<-AffyRNAdeg(Data)
> 
> 
>>png(DegLoc, width=720, height=720)
> 
> 
>>par(ann=FALSE)
> 
> 
>>par(mar=c(3,3,0.1,0.1))
> 
> 
>>plotAffyRNAdeg(RNAdeg,col=cols, cex.axis=1.2)
> 
> 
> Error in plot.window(xlim, ylim, log, asp, ...) : 
> 
>         need finite 'ylim' values
> 
> 
>>dev.off()
> 
> 
> null device 
> 
>           1
> 
>  
> 
> Thanks in advance
> 
> Tony
> 
> 
> 	[[alternative HTML version deleted]]
> 
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-- 
James W. MacDonald, M.S.
Biostatistician
Affymetrix and cDNA Microarray Core
University of Michigan Cancer Center
1500 E. Medical Center Drive
7410 CCGC
Ann Arbor MI 48109
734-647-5623


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