[R] A combinatorial task. How to get rid of loops
Serguei.Kaniovski at wifo.ac.at
Thu Aug 2 10:40:58 CEST 2007
I am looking for a faster way of accomplishing this:
# n is an integer larger than two
n <- 3
# matrix of 2^n binary outcomes
bmat <- as.matrix(expand.grid( rep( list(1:0), n))[, n:1])
# I would like to know which rows of "bmat" have "1" in the "i" and "j"
coordinates, so for n=3 in coordinates 1-2, 1- 3, and 2-3
# I would like then to construct "choose( n, 2)" binary vectors of lengths
2^n to indicate those rows with a "1"
# The loop below accomplishes this task. Is there a faster way of doing
# matrix of all pairwise combinations
cmat<-combn( n, 2)
temp<-matrix(NA, nrow(bmat), ncol(cmat))
for (i in 1:nrow(bmat))
for (j in 1:ncol(cmat))
temp[ i, j]<-as.numeric( bmat[i,][cmat[1,j]] &
bmat[i,][cmat[2,j]] == 1)
Thank you very much for your help!
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