[R] justRMA

Uwe Ligges ligges at statistik.uni-dortmund.de
Wed Sep 20 01:01:30 CEST 2006

Michael Gormley wrote:

> I am trying to preprocess a large dataset of affymetrix data.  Creating an affybatch is not possible with the computer I am running it on, so I have used the justRMA command to run RMA.  I have read the affy document describing the justRMA command and the help documentation but I am unclear as to whether this command uses median polish after normalization.  I assume this is the case but would like to be sure before proceeding.  Could someone clear up this confusion? 

Maybe you want to ask on the Bioconductor mailing list, in fact?

Uwe Ligges

> Thanks,
> Mike
> 	[[alternative HTML version deleted]]
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