[R] Problem with file size
Benilton Carvalho
bcarvalh at jhsph.edu
Tue Nov 14 04:50:48 CET 2006
Hi everyone,
I have 2 environments (2 different R sessions) as described below:
Session 1:
Name of the environment: "CrlmmInfo"
Objects in the environment:
index1: logical index - length 238304
index2: logical index - length 238304
priors: list of 4 - (matrix 6x6, 2 vectors of length 6, vector of
length 2) - all num
params: list of 4:
centers [238304 x 3 x 2]: num
scales [238304 x 3 x 2]: num
N [238304 x 3]: num
f0 [scalar]: num
If I save this environment to a file, I get a file of 23MB. Great.
Session 2:
Analogous to "Session 1", but replace 238304 by 262264.
If I save the environment on Session 2, I get a file of 8.4GB.
I applied object.size on each of the objects in each environment, and
this is what I got:
For Session 1:
index1: 16204864
index2: 16204864
priors: 3336
params: 74353584
For Session 2:
index1: 1049096
index2: 1049096
priors: 3336
params: 81829104
Is this increase from 23MB to 8.4GB expected to happen?
Benilton
sessionInfo() on both sessions is identical:
> sessionInfo()
R version 2.4.0 (2006-10-03)
x86_64-unknown-linux-gnu
locale:
LC_CTYPE=en_US.iso885915;LC_NUMERIC=C;LC_TIME=en_US.iso885915;LC_COLLATE
=en_US.iso885915;LC_MONETARY=en_US.iso885915;LC_MESSAGES=en_US.iso885915
;LC_PAPER=en_US.iso885915;LC_NAME=C;LC_ADDRESS=C;LC_TELEPHONE=C;LC_MEASU
REMENT=en_US.iso885915;LC_IDENTIFICATION=C
attached base packages:
[1] "methods" "stats" "graphics" "grDevices" "utils"
"datasets"
[7] "base"
> version
_
platform x86_64-unknown-linux-gnu
arch x86_64
os linux-gnu
system x86_64, linux-gnu
status
major 2
minor 4.0
year 2006
month 10
day 03
svn rev 39566
language R
version.string R version 2.4.0 (2006-10-03)
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