[R] data manipulation docs
Frank E Harrell Jr
f.harrell at vanderbilt.edu
Fri May 5 17:43:55 CEST 2006
Federico Calboli wrote:
> Hi All,
>
> Is there some document/manual about data manipulation within R that I
> could use as a reference (obviously, aside the R manuals)?
>
> The reason I am asking is that I have a number of data frames/matrices
> containg genetic data. The data is in a character form, as in:
>
> V1 V2 V3 V4 V5
> 1 AA AG AA GG AG
> 2 AC AA AA GG AG
> 3 AA AG AA GG AG
> 4 AA AA AA GG AG
> 5 AA AA AA GG AA
>
> I need, to chop, subset, and variously manipulate this kind of data,
> sometimes keeping the data in its character format, sometimes converting
> it to numeric form (i.e. substitute each data point with the equivalent
> factor value). Since the data is ofthe quite big, I have to keep things
> memory efficient.
>
> This whole game is getting excedingly time consuming and frustrating,
> because I end up with random pieces of code that I save, patching a
> particular problem, but difficult to be 'abstracted' for a new task, so
> I get back close to square one annoyingly often.
>
> Cheers,
>
> Federico Calboli
>
>
There is a large data manipulation section on the Alzola Harrell
document available on CRAN under contributed docs, or a slightly more up
to date version at biostat.mc.vanderbilt.edu
--
Frank E Harrell Jr Professor and Chair School of Medicine
Department of Biostatistics Vanderbilt University
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