[R] multi-dimension array of raw
Prof Brian Ripley
ripley at stats.ox.ac.uk
Wed Jun 21 09:50:33 CEST 2006
On Tue, 20 Jun 2006, Duncan Murdoch wrote:
> On 6/20/2006 6:24 PM, Gerald Jansen wrote:
>> I would like to store and manipulate large sets of marker genotypes
>> compactly using "raw" data arrays. This works fine for vectors or
>> matrices, but I run into the error shown in the example below as soon
>> as I try to use 3 dimensional arrays (eg. animal x marker x allele).
>>
>>> a <- array(as.raw(1:6),c(2,3))
>>> a
>> [,1] [,2] [,3]
>> [1,] 01 03 05
>> [2,] 02 04 06
>>> a[1,] <- raw(3)
>>> a
>> [,1] [,2] [,3]
>> [1,] 00 00 00
>> [2,] 02 04 06
>>> b <- array(as.raw(1:6),c(1,2,3))
>>> b[1,,]
>> [,1] [,2] [,3]
>> [1,] 01 03 05
>> [2,] 02 04 06
>>> b[1,1,] <- raw(3)
>> Error: incompatible types (from raw to raw) in array subset assignment
>>
>> I can work around this with computed indices, but I wonder if this is
>> expected behaviour.
>
> I don't think so. It is just an unimplemented case.
>
> Using raw in this way is a fairly unusual thing to do, and you've come
> across a case nobody thought of implementing.
Actually, raw arrays were originally not implemented at all, so this is
`expected behaviour', and you may well encounter other unimplemented areas
as no one has attempted to implement them comprehensively. Please report
them, but on R-devel not here.
--
Brian D. Ripley, ripley at stats.ox.ac.uk
Professor of Applied Statistics, http://www.stats.ox.ac.uk/~ripley/
University of Oxford, Tel: +44 1865 272861 (self)
1 South Parks Road, +44 1865 272866 (PA)
Oxford OX1 3TG, UK Fax: +44 1865 272595
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