[R] grouping by consecutive integers
Kevin J Emerson
kemerson at uoregon.edu
Mon Jul 24 18:20:09 CEST 2006
Let me clarify one thing that I dont think I made clear in my posting.
I am looking for the max, min and median of the indicies, not of the
time series frequency counts. I am looking to find the max, min, and
median time of peaks in a time series, so i am looking for the
information concerning that.
so mostly my question is how to extract the information of max, min, and
median of sequential numbers in a vector. I will reword my original
> > Hello R-helpers!
> > I have a question concerning extracting sequence information from a
> > vector. I have a vector (representing the bins of a time series where
> > the frequency of occurrences is greater than some threshold) where I
> > would like to extract the min, median and max of each group of
> > consecutive numbers in the index vector..
> > For Example:
> > tmp <- c(24,25,29,35,36,37,38,39,40,41,42,43,44,45,46,47,68,69,70,71)
> > I would like to have the max,min,median of the following groups:
> > 24,25 - max = 25, min = 24 median = 24.5
> > 29 max=min=median = 29
> > 35,36,37,38,39,40,41,42,43,44,45,46,47, max = 45 min = 35 etc...
> > 68,69,70,71
> > I would like to be able to perform this for many time series so an
> > automated process would be nice. I am hoping to use this as a peak
> > detection protocol.
> > Any advice would be greatly appreciated,
> > Kevin
> > -----
> > -----
> > Kevin J Emerson
> > Center for Ecology and Evolutionary Biology
> > 1210 University of Oregon
> > Eugene, OR 97403
> > USA
> > kemerson at uoregon.edu
> > ______________________________________________
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> > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
> > and provide commented, minimal, self-contained, reproducible code.
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