[R] yet another lmer question
Andrew Gelman
gelman at stat.columbia.edu
Sat Jan 28 18:09:56 CET 2006
I've been trying to keep track with lmer, and now I have a couple of
questions with the latest version of Matrix (0.995-4). I fit 2 very
similar models, and the results are severely rounded in one case and
rounded not at all in the other.
> y <- 1:10
> group <- rep (c(1,2), c(5,5))
> M1 <- lmer (y ~ 1 + (1 | group))
> coef(M1)
$group
(Intercept)
1 3.1
2 7.9
> x <- rep (c(1,2), c(3,7))
> M2 <- lmer (y ~ 1 + x + (1 + x | group))
> coef(M2)
$group
(Intercept) x
1 -0.755102 2.755102
2 0.616483 3.640738
I can't figure out why everything is rounded for the first model but not
for the second. Also, mcmcsamp() works for M1 but not for M2:
> mcmcsamp(M1)
(Intercept) log(sigma^2) log(grop.(In))
[1,] 9.099073 0.5711817 3.246981
attr(,"mcpar")
[1] 1 1 1
attr(,"class")
[1] "mcmc"
> mcmcsamp(M2)
Error: inconsistent degrees of freedom and dimension
Error in t(.Call("mer_MCMCsamp", object, saveb, n, trans, PACKAGE =
"Matrix")) :
unable to find the argument 'x' in selecting a method for
function 't'
--
Andrew Gelman
Professor, Department of Statistics
Professor, Department of Political Science
gelman at stat.columbia.edu
www.stat.columbia.edu/~gelman
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