[R] C compile problem on Ubuntu linux
Frank E Harrell Jr
f.harrell at vanderbilt.edu
Sun Aug 20 20:39:38 CEST 2006
Under Ubuntu dapper, after installing packages gcc and g77, under
platform i486-pc-linux-gnu
arch i486
os linux-gnu
system i486, linux-gnu
status
major 2
minor 2.1
year 2005
month 12
day 20
svn rev 36812
language R
I get an error when trying to update.packages('Hmisc'):
gcc -I/usr/lib/R/include -fPIC -g -O2 -c ranksort.c -o ranksort.o
In file included from ranksort.c:1:
/usr/lib/R/include/R.h:32:20: error: stdlib.h: No such file or directory
/usr/lib/R/include/R.h:33:19: error: stdio.h: No such file or directory
In file included from
/usr/lib/gcc/i486-linux-gnu/4.0.3/include/syslimits.h:7,
from
/usr/lib/gcc/i486-linux-gnu/4.0.3/include/limits.h:11,
from /usr/lib/R/include/R.h:34,
from ranksort.c:1:
/usr/lib/gcc/i486-linux-gnu/4.0.3/include/limits.h:122:61: error:
limits.h: No such file or directory
In file included from ranksort.c:1:
/usr/lib/R/include/R.h:36:18: error: math.h: No such file or directory
In file included from /usr/lib/R/include/R.h:49,
from ranksort.c:1:
/usr/lib/R/include/R_ext/RS.h:23:38: error: string.h: No such file or
directory
make: *** [ranksort.o] Error 1
ERROR: compilation failed for package 'Hmisc'
Any help appreciated
Frank
--
Frank E Harrell Jr Professor and Chair School of Medicine
Department of Biostatistics Vanderbilt University
More information about the R-help
mailing list