[R] R performance: different CPUs
Liaw, Andy
andy_liaw at merck.com
Thu Apr 6 02:57:39 CEST 2006
From: Jasjeet Singh Sekhon
>
> > This would be true of 64-bit builds of R, not 64-bit CPUs. [...]
> > This doesn't mean that a 32-bit build of R on a 64-bit
> processor will be
> > slower than a 32-bit build of R on a 32-bit processor.
>
> There is the issue, however, of running a 32bit application
> on a 64bit OS. Under RedHat and SuSE this works
> transparently and I've not noticed a performance issue, but
> under Debian's or Ubuntu's chroot setup there is in my
> experience a measurable performance hit. Of course, one
> could simply run 32bit Debian along with 32bit R on an Opteron.
It's my recollection that about a year ago there was still fierce debate
about Debian on x86_64: One group got a pure 64-bit version to a usable
state sooner than another group that was trying to make a standard
conforming version that would run both 64- and 32-bit apps transparently. I
don't know how that was resolved in the end, but that basically was enough
for me to steer clear of any Debian-based distro for x86_64.
Andy
> Cheers,
> Jas.
>
> =======================================
> Jasjeet S. Sekhon
>
> Associate Professor
> Travers Department of Political Science
> Survey Research Center
> UC Berkeley
>
> http://sekhon.berkeley.edu/
> V: 510-642-9974 F: 617-507-5524
> =======================================
>
>
>
> Thomas Lumley writes:
> > On Wed, 5 Apr 2006, Jasjeet Singh Sekhon wrote:
> >
> > >
> > > Hi,
> > >
> > > 64bit CPUs, such as opterons, help significantly with
> large databases > > or if you are running multiple
> processes. But there is a speed > > penalty if you are not. >
> > This would be true of 64-bit builds of R, not 64-bit CPUs.
> >
> > On a 64-bit processor you can usually run either 64-bit or
> 32-bit builds
> > of R, and the 64-bit one will be able to access more
> memory but will be
> > slower.
> >
> > This doesn't mean that a 32-bit build of R on a 64-bit
> processor will be
> > slower than a 32-bit build of R on a 32-bit processor.
> >
> > -thomas
> >
> > Thomas Lumley Assoc. Professor, Biostatistics
> > tlumley at u.washington.edu University of Washington, Seattle
>
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