[R] Repeated measure Generalized Linear Mixed Model (glmm) ?
Jérôme Lemaître
je_lemaitre at hotmail.com
Thu Sep 29 16:42:25 CEST 2005
Dear all,
I want to know the probability of dying in a trap as a function of habitat
variables for a metapopulation of voles sampled in 44 stations.
My dataset is as follow:
Station tag number dead habitat1 habitat2
1 1 yes 20 26
1 2 no 20 26
2 3 no 15 16
..
As far as I know, I should use a mixed-model as:
glmmPQL<-(fixed = dead~habitat1+habitat2, random = ~1|station, family =
binomial) in the MASS library.
However, some vole individuals were recaptured (but it is not a study
designed for capture-mark-recapture!!!) therefore, I have for example, the
4th vole:
Station tag number dead habitat1 habitat2
3 4 no 10 12
3 4 yes 10 12
Someone suggested me to use glmm with repeated measures with the number of
tag as the variable to repeat. Apparently, it is possible to do this in SAS.
QUESTIONS :
1) Is this also possible to do this in R, and if yes, could you please tell
me how?
2) Is this a valid way to analyse this data, and if not, could someone
please put me in the right way?
Thank you very very much to all in advance
Jérôme Lemaître
Étudiant au doctorat
Université Laval
Québec, QC G1K 7P4
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