[R] AIC in lmer
Richard Chandler
rchandler at forwild.umass.edu
Fri Oct 7 13:47:24 CEST 2005
Hello all,
Is AIC calculated incorrectly in lmer? It appears as though it uses
AIC = -2*logLik - 2*#parms, instead of -2*LogLik + 2*#parms? Below is
output from one of many models I have tried:
Generalized linear mixed model fit using PQL
Formula: cswa ~ pcov.ess1k + (1 | year)
Data: ptct50.5
Family: poisson(log link)
AIC BIC logLik deviance
224.8466 219.19 -114.4233 228.8466
Random effects:
Groups Name Variance Std.Dev.
year (Intercept) 0.0062643 0.079147
# of obs: 125, groups: year, 2
Estimated scale (compare to 1) 1.277183
Fixed effects:
Estimate Std. Error z value Pr(>|z|)
(Intercept) -0.1059628 0.1283976 -0.82527 0.4092
pcov.ess1k 0.0101182 0.0093962 1.07683 0.2816
A snip of my data:
cswa pcov.ess250 year
[1,] 4 7.14 2004
[2,] 4 19.26 2003
[3,] 1 3.66 2004
I'm using R 2.1.1 with Windows XP.
Thanks,
Richard
--
Richard Chandler
Department of Natural Resources Conservation
UMass Amherst
(413)545-1237
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