[R] R: looping

Huntsinger, Reid reid_huntsinger at merck.com
Fri May 20 18:16:56 CEST 2005

Are you sure that's what you want to do? The subscript is a logical vector
of length 3, subscripting a 3 x 3 matrix, so you're treating the matrix as a
vector (stacked columns) and recycling the indices. The first iteration
modifies 6 entries of the matrix. 

It looks like you want to replace the entries in the ith column which exceed
top[i] by top[i] (lost the ",i" in the subscript expression in copying,
perhaps). That could be done in several ways. You can either create a matrix
out of top of the same shape as z and then compare element-by-element, with
pmin for example, or use the recycling rule. That latter is cleaner if z is
transposed, but

> t(pmin(t(z),top))


You could use apply as well, like

> apply(z,1,function(x) pmin(x,top))

to compare each row with the vector top, but you have to transpose the
result. I don't see any advantage to this, though. 

Reid Huntsinger

-----Original Message-----
From: r-help-bounces at stat.math.ethz.ch
[mailto:r-help-bounces at stat.math.ethz.ch] On Behalf Of Clark Allan
Sent: Friday, May 20, 2005 10:01 AM
To: r-help at stat.math.ethz.ch
Subject: [R] R: looping

hi all

i have a simple question. code is displayed below. 

how can i use a vectorised command in order to do this (ie replace the
loop)? (ie apply, lapply, sweep, etc)


for (i in 1:3)	z[z[,i]>top[i]]<-top[i]

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