[R] nls(): Levenberg-Marquardt, Gauss-Newton, plinear - PI curve fitting
Christfried Kunath
mailpuls at gmx.net
Tue Jun 21 11:57:39 CEST 2005
Hello,
i have a problem with the function nls().
This are my data in "k":
V1 V2
[1,] 0 0.367
[2,] 85 0.296
[3,] 122 0.260
[4,] 192 0.244
[5,] 275 0.175
[6,] 421 0.140
[7,] 603 0.093
[8,] 831 0.068
[9,] 1140 0.043
With the nls()-function i want to fit following formula whereas a,b, and c
are variables: y~1/(a*x^2+b*x+c)
With the standardalgorithm "Newton-Gauss" the fitted curve contain an peak
near the second x,y-point.
This peak is not correct for my purpose. The fitted curve should descend
from the maximum y to the minimum y given in my data.
The algorithm "plinear" give me following error:
phi function(x,y) {
k.nls<-nls(y~1/(a*(x^2)+b*x+c),start=c(a=0.0005,b=0.02,c=1.5),alg="plinear")
coef(k.nls)
}
phi(k[,1],k[,2])
Error in qr.solve(QR.B, cc) : singular matrix `a' in solve
I have found in the mailinglist
"https://stat.ethz.ch/pipermail/r-help/2001-July/012196.html" that is if t
he data are artificial. But the data are from my measurment.
The commercial software "Origin V.6.1" solved this problem with the
Levenberg-Marquardt algorithm how i want.
The reference results are: a = 9.6899E-6, b = 0.00689, c = 2.72982
What are the right way or algorithm for me to solve this problem and what
means this error with alg="plinear"?
Thanks in advance.
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