[R] Fortran compilation error
Brian Beckage
Brian.Beckage at uvm.edu
Fri Jun 10 18:49:18 CEST 2005
Hello,
I'm trying to install a package that requires a Fortran compiler
(Hmisc) using R CMD INSTALL. I downloaded the package source onto my
Desktop, unzipped it, and then typed:
R CMD INSTALL /Users/brianbeckage/Desktop/Hmisc
* Installing *source* package 'Hmisc' ...
** libs
g77 -fno-common -g -O2 -c cidxcn.f -o cidxcn.o
g77 -fno-common -g -O2 -c cidxcp.f -o cidxcp.o
g77 -fno-common -g -O2 -c hoeffd.f -o hoeffd.o
g77 -fno-common -g -O2 -c jacklins.f -o jacklins.o
g77 -fno-common -g -O2 -c largrec.f -o largrec.o
gcc-3.3 -no-cpp-precomp
-I/Library/Frameworks/R.framework/Resources/include
-I/usr/local/include -fno-common -g -O2 -c ranksort.c -o ranksort.o
g77 -fno-common -g -O2 -c rcorr.f -o rcorr.o
g77 -fno-common -g -O2 -c wclosest.f -o wclosest.o
gcc-3.3 -bundle -flat_namespace -undefined suppress -L/usr/local/lib
-o Hmisc.so cidxcn.o cidxcp.o hoeffd.o jacklins.o largrec.o
ranksort.o rcorr.o wclosest.o
-L/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2 -lg2c -lSystem
-lcc_dynamic -framework R
ld: warning -L: directory name
(/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2) does not exist
ld: can't locate file for: -lg2c
make: *** [Hmisc.so] Error 1
ERROR: compilation failed for package 'Hmisc'
** Removing
'/Library/Frameworks/R.framework/Versions/2.1.0/Resources/library/Hmisc'
** Restoring previous
'/Library/Frameworks/R.framework/Versions/2.1.0/Resources/library/Hmisc'
Any ideas as to what file -lg2c represents and how I correct this?
I'm running R 2.1.0 Patched under OSX 10.3.9.
Thanks,
Brian
--
*********************************************************************
Brian Beckage
Department of Botany
University of Vermont
Marsh Life Science Building
Burlington, VT 05405
Phone: 802 656-0197
Fax : 802 656-0440
email: Brian.Beckage at uvm.edu
web : www.uvm.edu/~bbeckage
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